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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
DNase-seq
1
single cell RNA-seq
Assay category
70
DNA binding
7
DNA accessibility
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
683
February, 2021
356
November, 2017
341
May, 2020
306
August, 2021
261
May, 2021
245
October, 2019
206
June, 2019
149
February, 2023
131
August, 2017
96
May, 2022
79
December, 2017
78
November, 2018
77
July, 2019
60
May, 2019
50
March, 2020
47
September, 2023
43
April, 2019
40
September, 2020
35
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
8
October, 2017
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
78
fastq
77
bam
70
bed narrowPeak
70
bigBed narrowPeak
70
bigWig
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
1
csv
Organism
78
Homo sapiens
Biosample type
60
cell line
17
tissue
1
primary cell
Organ
52
liver
15
blood
15
bodily fluid
7
spleen
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
78
AMP
Genome assembly (visualization)
70
GRCh38
68
hg19
Lab
78
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
organ_slims!
pancreas
assay_slims!
DNA methylation
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
DNase-seq
single cell RNA-seq
cell line
HepG2
45
GM12878
15
tissue
spleen
6
1
liver
4
2
brain
2
omental fat pad
1
right lobe of liver
1
primary cell
pancreatic cell
1
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