Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
11
single cell RNA-seq
7
DNase-seq
3
WGBS
Assay category
70
DNA binding
11
Transcription
7
DNA accessibility
3
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
683
February, 2021
356
November, 2017
341
May, 2020
306
August, 2021
262
May, 2021
245
October, 2019
206
June, 2019
149
February, 2023
146
August, 2017
102
July, 2019
96
May, 2022
81
November, 2018
79
December, 2017
60
May, 2019
50
March, 2020
47
September, 2023
43
April, 2019
40
September, 2020
35
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
8
October, 2017
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
91
fastq
90
bam
83
bigWig
70
bed narrowPeak
70
bigBed narrowPeak
10
tsv
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
91
Homo sapiens
Biosample type
61
cell line
19
tissue
11
primary cell
Organ
53
liver
pancreas
33
epithelium
15
blood
15
bodily fluid
9
spleen
3
connective tissue
2
brain
1
adipose tissue
Project
91
AMP
Genome assembly (visualization)
83
GRCh38
78
hg19
Lab
91
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
organ_slims!
pancreas
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
DNase-seq
WGBS
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
brain
2
omental fat pad
1
right lobe of liver
1
primary cell
mesenchymal cell
5
pancreatic cell
4
enteroendocrine cell
2
Download