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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ATAC-seq
20
total RNA-seq
11
ChIP-seq
2
Hi-C
Assay category
33
DNA accessibility
20
Transcription
11
DNA binding
2
3D chromatin structure
Target of assay
19
histone
19
histone modification
broad histone mark
5
control
5
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
715
February, 2021
341
May, 2020
323
May, 2021
310
August, 2021
296
November, 2017
283
August, 2017
252
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
108
July, 2019
79
December, 2017
79
November, 2018
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
23
June, 2019
20
May, 2024
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
63
bam
38
bed narrowPeak
34
bigWig
20
tsv
11
fastq
4
tagAlign
bed broadPeak
2
bedpe bed3+
2
hic
1
bigBed narrowPeak
Organism
66
Homo sapiens
Biosample type
51
tissue
10
cell line
5
in vitro differentiated cells
Organ
53
pancreas
10
epithelium
5
brain
2
adipose tissue
2
connective tissue
1
spleen
Project
66
AMP
Genome assembly (visualization)
59
hg19
58
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
target.investigated_as!
broad histone mark
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
66 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
body of pancreas
4
brain
4
adipose tissue(adipose white tissue)
1
cerebellum (Hemisphere)
1
+ See 2 more…
cell line
EndoC_BH1
1
1
7
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
See all biosamples
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