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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
33
DNA binding
9
DNA accessibility
Target of assay
26
transcription factor
8
RNA binding protein
8
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
December, 2018
18
January, 2019
15
November, 2018
8
January, 2021
1
January, 2018
Available data
33
bam
33
fastq
28
bigWig
27
bed narrowPeak
27
bigBed narrowPeak
Organism
42
Homo sapiens
Biosample type
34
cell line
8
primary cell
Organ
868
pancreas
748
liver
640
connective tissue
480
epithelium
471
adipose tissue
339
kidney
336
heart
216
brain
191
vasculature
185
blood vessel
159
bone element
127
artery
88
limb
76
musculature of body
61
eye
42
blood
42
bodily fluid
33
embryo
27
nerve
20
lung
18
ureter
16
skeleton
14
spleen
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
34
AMP
8
T1D
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
34
AMP-T2D consortium
8
Kyle Gaulton, UCSD
target.investigated_as!
broad histone mark
month_released!
December, 2018
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
33
1
primary cell
peripheral blood mononuclear cell
8
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