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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
12
DNA binding
3
DNA accessibility
Target of assay
10
histone
10
histone modification
broad histone mark
5
control
4
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
9
November, 2017
4
October, 2017
2
November, 2018
Available data
182
bam
162
bigWig
142
bed narrowPeak
73
tagAlign
69
bigBed narrowPeak
43
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
15
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
15
Homo sapiens
Biosample type
9
primary cell
6
tissue
Organ
440
liver
419
pancreas
234
epithelium
89
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
23
embryo
20
spleen
15
brain
6
vasculature
3
blood vessel
2
musculature of body
Project
15
AMP
Genome assembly (visualization)
12
hg19
10
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
1
missing controlled_by
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
DNase-seq
ATAC-seq
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
tissue
brain
3
2
cerebellum (Hemisphere)
1
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