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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
13
ChIP-seq
2
single cell RNA-seq
1
pCHi-C
Assay category
58
Transcription
45
DNA accessibility
13
DNA binding
Target of assay
9
control
4
transcription factor
Date released
66
February, 2021
35
February, 2023
6
October, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
March, 2020
Available data
88
bam
71
bigWig
60
bed narrowPeak
59
tsv
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
117
Homo sapiens
Biosample type
66
cell line
49
tissue
2
primary cell
Organ
807
pancreas
616
connective tissue
461
adipose tissue
418
epithelium
412
liver
276
heart
247
kidney
159
bone element
149
vasculature
147
blood vessel
147
brain
116
artery
55
eye
38
limb
37
musculature of body
33
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
5
gonad
5
ovary
5
vein
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
117
AMP
Genome assembly (visualization)
103
GRCh38
68
hg19
Lab
117
AMP-T2D consortium
target.investigated_as!
broad histone mark
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
117 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
2
tibial artery
1
1
5
pulmonary artery
2
sigmoid colon
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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