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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
5
total RNA-seq
2
DNase-seq
2
pCHi-C
1
ATAC-seq
Assay category
19
DNA binding
5
Transcription
3
DNA accessibility
Target of assay
24
histone
24
histone modification
broad histone mark
11
control
8
narrow histone mark
Date released
26
October, 2019
2
March, 2020
1
February, 2020
Available data
26
bam
15
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
7
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
29
Homo sapiens
Biosample type
28
tissue
1
cell line
Organ
868
pancreas
749
liver
640
connective tissue
480
epithelium
471
adipose tissue
339
kidney
336
heart
216
brain
191
vasculature
185
blood vessel
159
bone element
127
artery
88
limb
76
musculature of body
69
blood
69
bodily fluid
61
eye
33
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
29
AMP-T2D consortium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
total RNA-seq
DNase-seq
pCHi-C
ATAC-seq
tissue
tibial nerve
19
5
2
1
sigmoid colon
1
cell line
MCF-7
1
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