Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
31
histone
31
histone modification
25
transcription factor
16
narrow histone mark
broad histone mark
chromatin remodeller
6
RNA binding protein
1
recombinant protein
Date released
11
August, 2017
9
November, 2017
6
December, 2017
1
February, 2018
1
October, 2018
Available data
28
bam
28
bigWig
28
fastq
27
bed narrowPeak
12
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
5
bed bed3+
5
tagAlign
Organism
28
Homo sapiens
Biosample type
10
in vitro differentiated cells
9
cell line
5
primary cell
3
tissue
1
stem cell
Organ
10
liver
6
pancreas
5
epithelium
4
connective tissue
2
embryo
Project
28
AMP
Genome assembly (visualization)
28
hg19
26
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
28
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
target.investigated_as!
broad histone mark
chromatin remodeller
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
4
definitive endodermal cell
2
Hepatic endoderm
1
Posterior foregut
1
pancreatic endoderm
1
+ See 1 more…
cell line
HepG2
9
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
tissue
body of pancreas
1
liver
1
pancreas
1
stem cell
hESC
1
See all biosamples
Download