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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
285
ChIP-seq
Assay category
285
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
control
66
recombinant protein
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
712
February, 2021
318
May, 2020
314
May, 2021
298
August, 2021
285
November, 2017
252
August, 2017
220
October, 2019
205
February, 2023
202
June, 2019
200
May, 2022
168
July, 2018
105
July, 2019
82
November, 2018
64
March, 2020
59
September, 2020
58
December, 2017
56
September, 2018
53
November, 2019
49
April, 2018
47
September, 2023
39
May, 2019
31
December, 2018
29
April, 2019
28
October, 2018
25
February, 2020
23
February, 2018
22
January, 2019
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
10
October, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
275
bam
273
bigWig
268
bed narrowPeak
267
bigBed narrowPeak
257
fastq
60
bed broadPeak
56
bigBed broadPeak
26
tagAlign
3
tar
Organism
285
Homo sapiens
Biosample type
251
cell line
28
tissue
6
primary cell
Organ
251
liver
34
brain
4
epithelium
4
vasculature
2
blood vessel
Project
285
AMP
Genome assembly (visualization)
255
hg19
235
GRCh38
Lab
285
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
broad histone mark
control
BIOSAMPLE
ASSAY
285 results
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Clear Filters
ChIP-seq
cell line
HepG2
251
tissue
layer of hippocampus
7
caudate nucleus
5
cingulate gyrus
5
middle frontal area 46
5
substantia nigra
5
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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