Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
16
DNA binding
2
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
November, 2018
3
January, 2019
1
March, 2020
1
October, 2017
Available data
20
bam
20
fastq
12
bigWig
10
bed narrowPeak
9
bigBed narrowPeak
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
19
Homo sapiens
Biosample type
19
tissue
Organ
857
pancreas
746
liver
637
connective tissue
471
epithelium
469
adipose tissue
335
kidney
328
heart
214
brain
189
vasculature
184
blood vessel
159
bone element
127
artery
87
limb
72
musculature of body
69
blood
69
bodily fluid
60
eye
33
embryo
27
nerve
20
lung
19
spleen
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
19
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
19
AMP-T2D consortium
target.investigated_as!
broad histone mark
nucleotide modification
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
16
1
1
1
Download