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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
8
snATAC-seq
2
ATAC-seq
Assay category
50
DNA binding
10
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
25
December, 2018
13
November, 2018
12
January, 2019
8
January, 2021
1
January, 2018
1
October, 2019
Available data
50
bam
50
fastq
45
bigWig
44
bed narrowPeak
44
bigBed narrowPeak
Organism
60
Homo sapiens
Biosample type
51
cell line
8
primary cell
1
tissue
Organ
938
pancreas
762
liver
673
connective tissue
504
epithelium
489
adipose tissue
363
heart
273
kidney
254
brain
225
vasculature
221
blood vessel
159
bone element
137
artery
86
limb
63
musculature of body
59
blood
59
bodily fluid
57
eye
41
nerve
37
embryo
24
spleen
20
lung
20
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
52
AMP
8
T1D
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
52
AMP-T2D consortium
8
Kyle Gaulton, UCSD
target.investigated_as!
chromatin remodeller
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
50
1
primary cell
peripheral blood mononuclear cell
8
tissue
islet of Langerhans
1
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