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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
ChIP-seq
65
total RNA-seq
47
ATAC-seq
27
DNase-seq
6
WGBS
1
small RNA-seq
Assay category
110
DNA binding
74
DNA accessibility
66
Transcription
6
DNA methylation
Target of assay
94
histone
94
histone modification
57
broad histone mark
37
narrow histone mark
16
transcription factor
10
RNA binding protein
Date released
64
February, 2021
46
April, 2019
40
May, 2024
35
February, 2023
27
June, 2019
17
July, 2019
15
May, 2019
7
October, 2019
3
May, 2021
2
March, 2020
Available data
213
bigWig
184
bed narrowPeak
181
bam
88
bigBed narrowPeak
66
tsv
27
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
4
tagAlign
Organism
256
Homo sapiens
Biosample type
191
tissue
64
cell line
primary cell
1
in vitro differentiated cells
Organ
532
connective tissue
499
liver
443
pancreas
422
adipose tissue
256
heart
203
brain
177
kidney
169
blood vessel
169
vasculature
126
artery
96
limb
68
epithelium
66
bone element
44
blood
44
bodily fluid
42
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
256
AMP
Genome assembly (visualization)
256
GRCh38
178
hg19
Lab
216
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
target.investigated_as!
chromatin remodeller
biosample_type!
primary cell
BIOSAMPLE
ASSAY
256 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
small RNA-seq
tissue
coronary artery
3
36
2
left cardiac atrium
40
1
heart left ventricle
28
3
2
3
2
heart
12
4
18
1
1
heart right ventricle
11
1
1
2
+ See 4 more…
cell line
smooth muscle cell of the coronary artery
4
52
8
in vitro differentiated cells
cardiac fibroblast
1
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