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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ChIP-seq
5
GRO-seq
3
ATAC-seq
Assay category
91
DNA binding
3
DNA accessibility
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
chromatin remodeller
Date released
715
February, 2021
408
August, 2017
399
May, 2021
391
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
91
December, 2017
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
96
fastq
91
bam
77
bigWig
69
bed narrowPeak
47
bigBed narrowPeak
15
bed bed3+
Organism
99
Homo sapiens
Biosample type
48
tissue
46
in vitro differentiated cells
4
stem cell
1
cell line
Organ
60
liver
18
epithelium
14
embryo
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
musculature of body
Project
99
AMP
Genome assembly (visualization)
77
hg19
74
GRCh38
5
hg18
Lab
99
AMP-T2D consortium
Audit category:
25
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
99 results
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Clear Filters
ChIP-seq
GRO-seq
ATAC-seq
tissue
liver
36
right lobe of liver
10
adipose tissue
1
skeletal muscle tissue
1
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
9
1
Posterior foregut
5
1
definitive endodermal cell
5
1
primitive gut cell
5
1
+ See 1 more…
stem cell
hESC
3
1
cell line
GM12878
1
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