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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
183
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
92
histone
92
histone modification
69
transcription factor
58
broad histone mark
34
narrow histone mark
29
control
26
RNA binding protein
16
recombinant protein
chromatin remodeller
3
other context
3
other post-translational modification
Date released
715
February, 2021
408
August, 2017
399
May, 2021
391
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
91
December, 2017
81
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
200
bam
170
bigWig
163
bed narrowPeak
163
bigBed narrowPeak
81
fastq
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
201
Homo sapiens
Biosample type
141
tissue
54
cell line
6
primary cell
Organ
50
blood vessel
50
vasculature
48
liver
30
brain
21
heart
13
blood
13
bodily fluid
9
pancreas
9
spleen
7
limb
7
musculature of body
5
artery
5
epithelium
5
kidney
1
adipose tissue
1
connective tissue
Project
201
AMP
Genome assembly (visualization)
168
GRCh38
161
hg19
Lab
201
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
1
missing controlled_by
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
201 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 12 more…
cell line
HepG2
40
1
GM12878
13
primary cell
kidney epithelial cell
5
pancreatic cell
1
See all biosamples
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