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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
63
ChIP-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
single cell RNA-seq
Assay category
63
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
683
February, 2021
385
November, 2017
379
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
279
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
81
November, 2018
80
April, 2019
74
October, 2018
73
December, 2017
58
March, 2020
47
September, 2023
45
November, 2019
40
September, 2020
39
February, 2018
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
81
fastq
80
bam
73
bigWig
66
bed narrowPeak
66
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
81
Homo sapiens
Biosample type
54
cell line
26
tissue
1
primary cell
Organ
48
liver
13
blood
13
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
81
AMP
Genome assembly (visualization)
72
GRCh38
64
hg19
Lab
81
AMP-T2D consortium
Audit category:
1
missing controlled_by
target.investigated_as!
chromatin remodeller
organ_slims!
epithelium
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
DNase-seq
WGBS
FAIRE-seq
single cell RNA-seq
cell line
HepG2
40
1
GM12878
13
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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primary cell
pancreatic cell
1
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