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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
Assay category
36
DNA binding
Target of assay
65
histone
65
histone modification
49
transcription factor
36
broad histone mark
29
narrow histone mark
9
RNA binding protein
chromatin remodeller
1
other context
1
other post-translational modification
Date released
22
August, 2017
10
November, 2017
2
October, 2017
2
October, 2019
Available data
427
bigWig
420
bed narrowPeak
378
bam
242
bigBed narrowPeak
147
tagAlign
118
fastq
36
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
32
Homo sapiens
Biosample type
20
tissue
8
cell line
8
primary cell
Organ
8
liver
8
musculature of body
8
pancreas
4
brain
2
blood vessel
2
epithelium
2
vasculature
2
vein
Project
36
AMP
Genome assembly (visualization)
36
hg19
21
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
6
inconsistent control read length
2
inconsistent assembly
target.investigated_as!
chromatin remodeller
organ_slims!
ureter
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
tissue
skeletal muscle tissue
8
islet of Langerhans
4
pancreas
4
brain
2
cingulate gyrus
1
+ See 1 more…
cell line
HepG2
8
primary cell
skeletal muscle myoblast
6
endothelial cell of umbilical vein
2
See all biosamples
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