Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
45
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
RNA binding protein
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
23
December, 2018
12
November, 2018
10
January, 2019
8
January, 2021
1
January, 2018
Available data
45
bam
45
fastq
40
bigWig
39
bed narrowPeak
39
bigBed narrowPeak
Organism
54
Homo sapiens
Biosample type
46
cell line
8
primary cell
Organ
937
pancreas
718
liver
672
connective tissue
516
epithelium
486
adipose tissue
382
heart
351
kidney
283
brain
231
vasculature
226
blood vessel
159
bone element
140
artery
122
limb
96
musculature of body
60
eye
54
blood
54
bodily fluid
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
46
AMP
8
T1D
Genome assembly (visualization)
40
hg19
39
GRCh38
Lab
46
AMP-T2D consortium
8
Kyle Gaulton, UCSD
target.investigated_as!
chromatin remodeller
RNA binding protein
BIOSAMPLE
ASSAY
54 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
45
1
primary cell
peripheral blood mononuclear cell
8
Download