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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
1
ChIP-seq
Assay category
9
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
6
June, 2019
2
August, 2017
1
November, 2018
1
November, 2020
Available data
591
bam
568
bigWig
478
tsv
99
fastq
73
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
10
Homo sapiens
Biosample type
6
primary cell
3
tissue
1
in vitro differentiated cells
Organ
78
kidney
59
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
10
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
10 results
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DNase-seq
ChIP-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
subcutaneous abdominal adipose tissue
1
in vitro differentiated cells
adipocyte
1
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