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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
246
ChIP-seq
total RNA-seq
9
WGBS
6
RRBS
Assay category
246
DNA binding
15
DNA methylation
DNA accessibility
Target of assay
199
histone modification
198
histone
109
broad histone mark
88
narrow histone mark
control
47
transcription factor
8
RNA binding protein
3
chromatin remodeller
Date released
335
November, 2017
261
August, 2017
212
October, 2019
174
May, 2021
151
August, 2021
118
February, 2021
97
May, 2019
75
May, 2022
73
December, 2017
72
November, 2018
66
April, 2019
53
July, 2019
48
July, 2018
47
September, 2023
45
March, 2020
45
October, 2018
43
April, 2018
40
May, 2024
40
September, 2020
33
September, 2018
31
December, 2018
28
May, 2020
23
June, 2019
21
January, 2019
16
February, 2018
13
November, 2019
12
October, 2017
9
April, 2020
7
February, 2023
5
December, 2019
5
January, 2018
5
March, 2023
5
November, 2020
4
August, 2018
4
October, 2022
3
June, 2018
3
May, 2023
1
March, 2019
Available data
172
bigWig
158
fastq
152
bam
132
bed narrowPeak
74
tagAlign
39
bed broadPeak
32
bigBed narrowPeak
31
bed bed3+
13
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
255
Homo sapiens
Biosample type
161
tissue
59
in vitro differentiated cells
41
primary cell
Organ
109
connective tissue
73
pancreas
50
adipose tissue
41
liver
23
musculature of body
14
epithelium
Project
261
AMP
Genome assembly (visualization)
174
hg19
151
GRCh38
Lab
261
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
target.investigated_as!
control
assay_slims!
DNA accessibility
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
261 results
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Clear Filters
ChIP-seq
WGBS
RRBS
tissue
liver
37
3
1
islet of Langerhans
35
subcutaneous abdominal adipose tissue
31
3
skeletal muscle tissue
19
4
pancreas
12
+ See 2 more…
in vitro differentiated cells
adipocyte
59
primary cell
skeletal muscle myoblast
14
1
pancreatic endocrine cell
12
pancreatic alpha cell
7
pancreatic beta cell
7
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