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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
19
ChIP-seq
2
single cell RNA-seq
Assay category
58
Transcription
DNA accessibility
19
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
control
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
56
February, 2021
14
October, 2019
2
August, 2021
2
February, 2020
2
July, 2019
1
May, 2019
Available data
73
bam
73
bigWig
58
tsv
19
bed narrowPeak
15
bigBed narrowPeak
4
tagAlign
Organism
77
Homo sapiens
Biosample type
56
cell line
19
tissue
2
primary cell
Organ
647
pancreas
594
liver
582
connective tissue
447
adipose tissue
322
epithelium
256
heart
164
kidney
147
bone element
130
vasculature
128
blood vessel
101
brain
77
artery
53
blood
53
bodily fluid
46
limb
42
musculature of body
25
eye
22
embryo
21
nerve
13
spleen
11
vein
10
lung
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
73
GRCh38
73
hg19
Lab
77
AMP-T2D consortium
target.investigated_as!
control
narrow histone mark
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
77 results
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total RNA-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
1
14
coronary artery
1
1
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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