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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
48
DNA binding
44
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
control
14
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
February, 2021
6
May, 2019
1
July, 2019
Available data
97
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
97
Homo sapiens
Biosample type
97
tissue
Organ
647
pancreas
580
liver
565
connective tissue
423
adipose tissue
290
epithelium
213
brain
191
heart
163
vasculature
159
blood vessel
132
kidney
97
limb
93
artery
66
bone element
54
blood
54
bodily fluid
54
musculature of body
31
nerve
29
embryo
18
ureter
18
vein
16
spleen
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
97
AMP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
97
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
control
assay_title!
GRO-seq
BIOSAMPLE
ASSAY
97 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
6
13
1
muscle of arm
17
distal epiphysis of femur
1
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