Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
total RNA-seq
20
ATAC-seq
14
ChIP-seq
2
STARR-seq
Hi-C
1
whole genome sequencing assay
Assay category
29
Transcription
20
DNA accessibility
14
DNA binding
1
DNA sequencing
Target of assay
11
transcription factor
control
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
40
May, 2022
26
August, 2021
Available data
34
bed narrowPeak
34
bigWig
9
tsv
1
vcf
Organism
66
Homo sapiens
Biosample type
40
tissue
26
cell line
Organ
211
pancreas
190
kidney
152
epithelium
66
liver
40
heart
19
lung
8
blood
8
bodily fluid
5
connective tissue
1
bone element
1
bone marrow
1
thymus
Project
66
AMP
Genome assembly (visualization)
34
hg19
Lab
AMP-T2D consortium
40
Karen Mohlke, UNC
26
Bing Ren, UCSD
target.investigated_as!
control
assay_title!
Hi-C
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
66 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
STARR-seq
whole genome sequencing assay
tissue
liver
20
20
cell line
HepG2
9
14
2
1
Download