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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
335
ChIP-seq
Assay category
335
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
control
66
recombinant protein
50
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
584
February, 2021
361
August, 2017
335
November, 2017
310
May, 2020
304
August, 2021
300
May, 2021
255
October, 2019
200
May, 2022
194
February, 2023
188
June, 2019
162
July, 2018
103
July, 2019
95
May, 2019
82
November, 2018
73
September, 2018
71
December, 2017
66
April, 2019
59
September, 2020
49
April, 2018
47
March, 2020
47
October, 2018
47
September, 2023
39
November, 2019
31
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
8
December, 2019
8
January, 2018
8
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
2
June, 2018
1
August, 2022
Available data
321
bam
318
bigWig
313
bed narrowPeak
312
bigBed narrowPeak
265
fastq
70
bed broadPeak
67
tagAlign
64
bigBed broadPeak
3
tar
Organism
335
Homo sapiens
Biosample type
259
cell line
70
tissue
6
primary cell
Organ
259
liver
76
brain
4
epithelium
4
vasculature
2
blood vessel
Project
335
AMP
Genome assembly (visualization)
280
GRCh38
265
hg19
Lab
335
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
control
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
335 results
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Clear Filters
ChIP-seq
cell line
HepG2
259
tissue
layer of hippocampus
19
caudate nucleus
13
substantia nigra
13
cingulate gyrus
12
middle frontal area 46
12
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primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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