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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
2
ATAC-seq
Assay category
178
DNA accessibility
Date released
163
June, 2019
9
November, 2018
4
October, 2019
1
March, 2019
1
October, 2017
Available data
1740
bam
1732
bigWig
1076
tsv
944
bed narrowPeak
561
bigBed narrowPeak
310
fastq
213
bed broadPeak
202
bed bed3+
tagAlign
176
bigBed broadPeak
157
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
178
Homo sapiens
Biosample type
178
tissue
48
cell line
38
primary cell
1
in vitro differentiated cells
Organ
68
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
8
pancreas
5
blood vessel
5
vasculature
4
artery
3
eye
3
liver
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
178
AMP
Genome assembly (visualization)
177
GRCh38
161
hg19
Lab
176
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
target.investigated_as!
control
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
178 results
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DNase-seq
ATAC-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
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