Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
DNase-seq
6
ChIP-seq
Assay category
22
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
18
June, 2019
6
October, 2019
4
November, 2017
Available data
427
bam
427
bigWig
264
bed narrowPeak
240
fastq
223
tsv
139
bigBed narrowPeak
80
zippedFastqFolder
28
bed broadPeak
28
bigBed broadPeak
27
bed bed3+
9
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
7
hic
6
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
28
Homo sapiens
Biosample type
23
primary cell
5
tissue
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
28
AMP
Genome assembly (visualization)
26
GRCh38
22
hg19
Lab
28
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 9 more…
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
See all biosamples
Download