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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
6
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
6
DNA binding
Target of assay
6
histone
6
histone modification
3
broad histone mark
control
3
narrow histone mark
Date released
10
February, 2018
8
August, 2021
December, 2017
2
May, 2021
1
January, 2018
Available data
21
bigWig
20
bam
14
tsv
11
fastq
6
bed narrowPeak
Organism
21
Homo sapiens
Biosample type
13
in vitro differentiated cells
8
cell line
Organ
874
pancreas
609
connective tissue
471
epithelium
450
adipose tissue
356
heart
332
kidney
328
liver
252
brain
205
vasculature
201
blood vessel
159
bone element
127
artery
105
limb
90
musculature of body
59
eye
32
nerve
21
embryo
20
lung
20
vein
18
ureter
16
skeleton
12
blood
12
bodily fluid
11
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
21
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
1
hg18
Lab
21
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
target.investigated_as!
control
transcription factor
month_released!
December, 2017
BIOSAMPLE
ASSAY
21 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
6
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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