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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
54
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
January, 2021
1
January, 2018
Available data
55
bigWig
54
bam
54
bed narrowPeak
54
bigBed narrowPeak
54
fastq
Organism
63
Homo sapiens
Biosample type
55
cell line
8
primary cell
Organ
879
pancreas
liver
647
connective tissue
488
epithelium
466
adipose tissue
366
heart
340
kidney
253
brain
210
vasculature
205
blood vessel
159
bone element
132
artery
105
limb
85
musculature of body
63
blood
63
bodily fluid
60
eye
32
nerve
30
embryo
19
lung
19
vein
18
ureter
16
skeleton
16
spleen
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
55
AMP
8
T1D
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
55
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
control
month_released!
March, 2020
organ_slims!
liver
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
54
1
primary cell
peripheral blood mononuclear cell
8
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