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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
8
snATAC-seq
1
ATAC-seq
1
RRBS
1
total RNA-seq
Assay category
54
DNA binding
9
DNA accessibility
1
DNA methylation
1
Transcription
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
January, 2021
2
July, 2019
1
January, 2018
Available data
56
bigWig
55
bam
54
bed narrowPeak
54
bigBed narrowPeak
54
fastq
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
65
Homo sapiens
Biosample type
55
cell line
9
primary cell
1
tissue
Organ
879
pancreas
680
liver
647
connective tissue
488
epithelium
466
adipose tissue
366
heart
340
kidney
253
brain
210
vasculature
205
blood vessel
159
bone element
132
artery
105
limb
85
musculature of body
63
blood
63
bodily fluid
60
eye
32
nerve
30
embryo
19
lung
19
vein
18
ureter
16
skeleton
16
spleen
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
bone marrow
1
lymph node
1
skin of body
1
spinal cord
1
thymus
Project
57
AMP
8
T1D
Genome assembly (visualization)
57
hg19
55
GRCh38
Lab
57
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
control
month_released!
March, 2020
BIOSAMPLE
ASSAY
65 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
RRBS
total RNA-seq
cell line
GM12878
54
1
primary cell
peripheral blood mononuclear cell
8
pericardium fibroblast
1
tissue
pericardium
1
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