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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
4
ChIP-seq
4
DNase-seq
4
pCHi-C
1
RRBS
Assay category
32
DNA accessibility
Transcription
4
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
control
1
transcription factor
Date released
27
February, 2023
7
October, 2019
6
June, 2019
1
July, 2019
Available data
33
bed narrowPeak
6
bam
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
41
Homo sapiens
Biosample type
37
tissue
4
primary cell
Organ
462
liver
414
pancreas
293
epithelium
234
brain
217
kidney
207
heart
168
connective tissue
147
vasculature
142
blood vessel
98
limb
97
bone element
81
musculature of body
74
artery
66
adipose tissue
63
blood
63
bodily fluid
41
eye
27
nerve
20
vein
18
ureter
17
spleen
16
embryo
12
skeleton
11
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
41
AMP
Genome assembly (visualization)
34
hg19
6
GRCh38
Lab
41
AMP-T2D consortium
target.investigated_as!
control
month_released!
May, 2020
assay_slims!
Transcription
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
pCHi-C
RRBS
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
2
4
primary cell
retinal pigment epithelial cell
2
1
1
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