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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
4
ATAC-seq
2
Capture-C
Assay category
14
DNA binding
4
DNA accessibility
Target of assay
8
histone
8
histone modification
6
transcription factor
control
4
broad histone mark
4
narrow histone mark
Date released
8
December, 2017
6
August, 2017
4
February, 2023
2
August, 2021
Available data
261
bam
259
bigWig
132
bed narrowPeak
131
tsv
119
fastq
30
tagAlign
20
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
193
tissue
37
primary cell
20
in vitro differentiated cells
3
cell line
2
stem cell
Organ
12
connective tissue
2
embryo
Project
20
AMP
Genome assembly (visualization)
20
hg19
14
GRCh38
Lab
18
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
Audit category:
8
inconsistent control read length
target.investigated_as!
control
month_released!
November, 2018
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
ATAC-seq
Capture-C
in vitro differentiated cells
adipocyte
6
1
1
Posterior foregut
2
definitive endodermal cell
2
immature adipocyte
2
pancreatic endoderm
2
primitive gut cell
2
osteoblast
1
preadipocyte
1
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