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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
27
ChIP-seq
16
snATAC-seq
1
pCHi-C
Assay category
190
Transcription
116
DNA accessibility
27
DNA binding
Target of assay
27
histone
27
histone modification
27
narrow histone mark
control
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
260
bam
260
bigWig
189
tsv
27
bed narrowPeak
27
tagAlign
Organism
334
Homo sapiens
Biosample type
178
tissue
155
primary cell
1
cell line
Organ
171
liver
8
blood
8
bodily fluid
8
pancreas
Project
273
AMP
61
T1D
Genome assembly (visualization)
260
hg19
207
GRCh38
Lab
273
AMP-T2D consortium
61
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
target.investigated_as!
control
month_released!
November, 2020
BIOSAMPLE
ASSAY
334 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
snATAC-seq
pCHi-C
tissue
liver
143
27
islet of Langerhans
4
pancreas
4
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
peripheral blood mononuclear cell
8
B cell
2
2
+ See 25 more…
cell line
HepG2
1
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