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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
WGBS
1
DNase-seq
1
pCHi-C
Assay category
12
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
January, 2019
6
November, 2018
3
December, 2018
1
March, 2020
October, 2017
Available data
15
bam
15
bigWig
15
fastq
13
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
832
pancreas
683
liver
634
connective tissue
465
adipose tissue
442
epithelium
342
kidney
337
heart
241
brain
179
vasculature
174
blood vessel
151
bone element
105
limb
97
artery
90
musculature of body
63
blood
63
bodily fluid
32
nerve
30
embryo
29
eye
20
lung
20
vein
18
ureter
16
spleen
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
16
AMP
Genome assembly (visualization)
15
GRCh38
13
hg19
Lab
16
AMP-T2D consortium
target.investigated_as!
control
month_released!
October, 2017
February, 2023
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
WGBS
DNase-seq
pCHi-C
tissue
spleen
12
2
1
1
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