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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
39
DNA binding
9
DNA accessibility
Target of assay
37
transcription factor
4
RNA binding protein
4
chromatin remodeller
control
Date released
27
December, 2018
January, 2019
12
November, 2018
8
January, 2021
1
January, 2018
Available data
40
bigWig
39
bam
39
bed narrowPeak
39
bigBed narrowPeak
39
fastq
Organism
48
Homo sapiens
Biosample type
40
cell line
8
primary cell
Organ
888
pancreas
678
liver
648
connective tissue
494
epithelium
466
adipose tissue
373
heart
342
kidney
242
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
60
eye
48
blood
48
bodily fluid
32
nerve
30
embryo
20
lung
20
vein
18
ureter
16
skeleton
10
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
40
AMP
8
T1D
Genome assembly (visualization)
40
hg19
39
GRCh38
Lab
40
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
control
month_released!
October, 2017
January, 2019
BIOSAMPLE
ASSAY
48 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
39
1
primary cell
peripheral blood mononuclear cell
8
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