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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
8
snATAC-seq
Assay category
73
DNA binding
8
DNA accessibility
Target of assay
42
transcription factor
31
histone
31
histone modification
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
680
February, 2021
335
November, 2017
330
May, 2021
318
May, 2020
303
August, 2021
263
October, 2019
206
June, 2019
194
August, 2017
149
February, 2023
99
July, 2019
96
May, 2019
96
May, 2022
75
November, 2018
73
December, 2017
66
April, 2019
50
March, 2020
47
September, 2023
40
May, 2024
40
September, 2020
31
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
19
April, 2020
15
May, 2023
15
October, 2017
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
5
October, 2018
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
73
bam
73
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
10
bed bed3+
Organism
81
Homo sapiens
Biosample type
36
tissue
35
in vitro differentiated cells
8
primary cell
2
stem cell
Organ
50
liver
16
epithelium
9
embryo
8
blood
8
bodily fluid
pancreas
Project
73
AMP
8
T1D
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
73
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
target.investigated_as!
control
organ_slims!
pancreas
BIOSAMPLE
ASSAY
81 results
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Clear Filters
ChIP-seq
snATAC-seq
tissue
liver
29
right lobe of liver
7
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
7
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 1 more…
primary cell
peripheral blood mononuclear cell
8
stem cell
hESC
2
See all biosamples
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