Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
380
ChIP-seq
2
total RNA-seq
Assay category
380
DNA binding
2
Transcription
Target of assay
259
transcription factor
118
histone
118
histone modification
control
69
broad histone mark
66
recombinant protein
49
narrow histone mark
48
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
368
bam
365
bigWig
358
bed narrowPeak
357
bigBed narrowPeak
298
fastq
70
bed broadPeak
67
tagAlign
64
bigBed broadPeak
3
tar
2
tsv
Organism
382
Homo sapiens
Biosample type
259
cell line
115
tissue
8
primary cell
Organ
259
liver
76
brain
42
pancreas
6
epithelium
5
adipose tissue
5
connective tissue
4
vasculature
2
blood vessel
Project
382
AMP
Genome assembly (visualization)
327
GRCh38
312
hg19
Lab
382
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
22
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
control
BIOSAMPLE
ASSAY
382 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
259
tissue
body of pancreas
25
layer of hippocampus
19
endocrine pancreas
14
caudate nucleus
13
substantia nigra
13
+ See 6 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
pancreatic acinar cell
2
See all biosamples
Download