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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
GRO-seq
5
MeRIP-seq
4
ATAC-seq
4
total RNA-seq
1
DNase-seq
Assay category
5
DNA accessibility
4
Transcription
Target of assay
control
5
nucleotide modification
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
13
bigWig
6
bam
5
fastq
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
19
Homo sapiens
Biosample type
6
primary cell
4
cell line
4
in vitro differentiated cells
4
tissue
1
stem cell
Organ
7
connective tissue
5
pancreas
3
epithelium
1
adipose tissue
1
blood
1
bodily fluid
1
embryo
1
musculature of body
Project
19
AMP
Genome assembly (visualization)
9
hg19
6
GRCh38
5
hg18
Lab
14
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
19 results
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Clear Filters
GRO-seq
MeRIP-seq
ATAC-seq
total RNA-seq
DNase-seq
primary cell
osteoblast
1
4
1
cell line
EndoC_BH1
3
GM12878
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
adipose tissue
1
skeletal muscle tissue
1
stem cell
hESC
1
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