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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
3
Hi-C
2
total RNA-seq
1
MPRA
Assay category
45
DNA binding
3
3D chromatin structure
2
Transcription
Target of assay
30
histone
30
histone modification
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
275
October, 2019
210
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
105
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
47
bam
47
bigWig
45
bed narrowPeak
45
bigBed narrowPeak
33
fastq
3
bedpe bed3+
3
cool
3
hic
2
tsv
1
txt
Organism
50
Homo sapiens
Biosample type
45
tissue
5
primary cell
1
cell line
Organ
45
pancreas
5
adipose tissue
5
connective tissue
5
epithelium
Project
48
AMP
3
HPAP
Genome assembly (visualization)
50
hg19
47
GRCh38
Lab
48
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
1
inconsistent control read length
target.investigated_as!
control
BIOSAMPLE
ASSAY
51 results
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Clear Filters
ChIP-seq
Hi-C
total RNA-seq
MPRA
tissue
body of pancreas
25
endocrine pancreas
14
omental fat pad
3
subcutaneous adipose tissue
2
pancreas
1
primary cell
pancreatic acinar cell
1
2
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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