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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
3
Hi-C
2
total RNA-seq
1
MPRA
Assay category
15
DNA binding
3
3D chromatin structure
2
Transcription
Target of assay
histone
30
histone modification
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
712
February, 2021
291
May, 2020
287
August, 2021
250
May, 2021
247
November, 2017
205
February, 2023
200
May, 2022
191
June, 2019
168
July, 2018
163
August, 2017
105
July, 2019
82
November, 2018
79
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
49
November, 2019
47
September, 2023
42
December, 2017
41
September, 2018
31
December, 2018
25
February, 2020
19
April, 2020
19
January, 2019
17
October, 2018
16
January, 2021
15
February, 2018
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
6
April, 2019
5
March, 2019
5
March, 2023
5
May, 2019
5
May, 2024
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
17
bam
17
bigWig
17
fastq
15
bed narrowPeak
15
bigBed narrowPeak
3
bedpe bed3+
3
cool
3
hic
2
tsv
1
txt
Organism
20
Homo sapiens
Biosample type
15
tissue
5
primary cell
1
cell line
Organ
15
pancreas
5
adipose tissue
5
connective tissue
5
epithelium
Project
18
AMP
3
HPAP
Genome assembly (visualization)
20
hg19
17
GRCh38
Lab
18
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
target.investigated_as!
control
histone
BIOSAMPLE
ASSAY
21 results
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Clear Filters
ChIP-seq
Hi-C
total RNA-seq
MPRA
tissue
body of pancreas
9
omental fat pad
3
subcutaneous adipose tissue
2
pancreas
1
primary cell
pancreatic acinar cell
1
2
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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