Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
183
DNase-seq
66
ChIP-seq
2
total RNA-seq
Assay category
183
DNA accessibility
66
DNA binding
2
Transcription
Target of assay
48
histone
48
histone modification
control
27
broad histone mark
21
narrow histone mark
18
transcription factor
14
RNA binding protein
Date released
712
February, 2021
390
May, 2021
361
August, 2017
335
November, 2017
318
May, 2020
307
August, 2021
254
October, 2019
204
June, 2019
200
May, 2022
174
February, 2023
168
July, 2018
104
July, 2019
97
May, 2019
82
November, 2018
73
December, 2017
73
September, 2018
66
April, 2019
64
March, 2020
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
24
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
November, 2020
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
251
bam
251
bigWig
249
bed narrowPeak
249
bigBed narrowPeak
183
bed bed3+
183
bed broadPeak
183
bigBed broadPeak
33
fastq
2
tsv
Organism
251
Homo sapiens
Biosample type
205
tissue
46
primary cell
Organ
80
kidney
46
pancreas
41
musculature of body
33
heart
32
limb
30
brain
20
connective tissue
20
epithelium
18
ureter
7
vasculature
6
adipose tissue
eye
5
blood vessel
2
artery
2
liver
Project
251
AMP
Genome assembly (visualization)
251
GRCh38
228
hg19
Lab
251
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
control
organ_slims!
eye
BIOSAMPLE
ASSAY
251 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
tissue
body of pancreas
2
25
heart
18
muscle of arm
17
endocrine pancreas
14
kidney
13
+ See 35 more…
primary cell
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
cardiac muscle cell
1
2
epithelial cell of proximal tubule
1
2
+ See 17 more…
See all biosamples
Download