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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1526
total RNA-seq
1487
ChIP-seq
523
ATAC-seq
360
single cell RNA-seq
176
DNase-seq
87
RNA microarray
84
snATAC-seq
74
WGBS
57
pCHi-C
30
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
5
MeRIP-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
Transcription
Date released
5
August, 2021
1
March, 2023
Organism
5
Homo sapiens
Biosample type
5
cell line
1
stem cell
Organ
2
kidney
2
liver
Project
5
AMP
1
community
Lab
5
Bing Ren, UCSD
1
Anna Gloyn, Oxford
Audit category:
1
inconsistent ontology term
target.investigated_as!
control
organ_slims!
limb
BIOSAMPLE
ASSAY
6 results
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STARR-seq
CRISPRi RNA-seq
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1
stem cell
SB Ad3.1
1