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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
1
ATAC-seq
Assay category
54
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
1
January, 2018
Available data
55
bigWig
54
bam
54
bed narrowPeak
54
bigBed narrowPeak
54
fastq
Organism
55
Homo sapiens
Biosample type
55
cell line
Organ
842
pancreas
683
liver
648
connective tissue
494
epithelium
467
adipose tissue
342
kidney
333
heart
255
brain
214
vasculature
209
blood vessel
158
bone element
132
artery
105
limb
90
musculature of body
60
eye
55
blood
55
bodily fluid
32
nerve
30
embryo
20
lung
20
vein
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
55
AMP-T2D consortium
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
control
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
55 results
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ChIP-seq
ATAC-seq
cell line
GM12878
54
1
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