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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
75
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
40
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
40
DNA binding
Target of assay
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
19
April, 2019
15
October, 2019
4
May, 2019
2
June, 2019
Available data
40
bam
39
bed narrowPeak
39
bigWig
24
bigBed narrowPeak
Organism
40
Homo sapiens
Biosample type
21
tissue
12
primary cell
7
cell line
Organ
444
liver
190
brain
170
pancreas
118
connective tissue
102
epithelium
80
vasculature
78
blood vessel
74
heart
54
blood
54
bodily fluid
49
adipose tissue
49
limb
40
kidney
33
musculature of body
25
artery
24
nerve
15
embryo
15
vein
12
spleen
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
40
AMP
Genome assembly (visualization)
39
GRCh38
39
hg19
Lab
40
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
40 results
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Clear Filters
ChIP-seq
tissue
kidney
21
primary cell
epithelial cell of proximal tubule
8
kidney epithelial cell
4
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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