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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
DNase-seq
76
ATAC-seq
64
single cell RNA-seq
60
total RNA-seq
41
ChIP-seq
6
snATAC-seq
4
RRBS
3
snDrop-seq
2
RNA microarray
2
STARR-seq
2
pCHi-C
1
FAIRE-seq
1
Hi-C
1
small RNA-seq
Assay category
41
DNA binding
Target of assay
31
histone
31
histone modification
16
narrow histone mark
15
broad histone mark
control
10
transcription factor
7
recombinant protein
3
RNA binding protein
Date released
19
April, 2019
16
October, 2019
4
May, 2019
2
June, 2019
Available data
41
bam
40
bed narrowPeak
40
bigWig
24
bigBed narrowPeak
1
tagAlign
Organism
41
Homo sapiens
Biosample type
22
tissue
12
primary cell
7
cell line
Organ
444
liver
190
brain
170
pancreas
118
connective tissue
114
heart
102
epithelium
80
vasculature
78
blood vessel
54
blood
54
bodily fluid
49
adipose tissue
49
limb
40
kidney
33
musculature of body
25
artery
24
nerve
15
embryo
15
vein
12
spleen
4
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
41
AMP
Genome assembly (visualization)
40
GRCh38
40
hg19
Lab
41
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
tissue
kidney
21
pituitary gland
1
primary cell
epithelial cell of proximal tubule
8
kidney epithelial cell
4
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
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