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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
pCHi-C
Assay category
12
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
January, 2019
6
November, 2018
3
December, 2018
1
October, 2017
Available data
16
bam
16
bigWig
16
fastq
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
16
Homo sapiens
Biosample type
16
tissue
Organ
892
pancreas
680
liver
644
connective tissue
494
epithelium
465
adipose tissue
340
kidney
330
heart
253
brain
213
vasculature
208
blood vessel
158
bone element
132
artery
105
limb
89
musculature of body
63
blood
63
bodily fluid
56
eye
32
nerve
30
embryo
20
vein
19
lung
18
ureter
16
skeleton
16
spleen
4
gonad
4
ovary
2
pericardium
2
pituitary gland
1
lymph node
1
skin of body
1
spinal cord
Project
16
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
16
AMP-T2D consortium
target.investigated_as!
control
assay_title!
pCHi-C
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
spleen
12
2
1
1
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