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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
8
snATAC-seq
1
ATAC-seq
1
pCHi-C
Assay category
44
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
RNA binding protein
10
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
25
December, 2018
10
November, 2018
9
January, 2019
8
January, 2021
1
January, 2018
1
March, 2020
Available data
45
bigWig
44
bam
44
bed narrowPeak
44
bigBed narrowPeak
44
fastq
1
tsv
Organism
54
Homo sapiens
Biosample type
45
cell line
8
primary cell
1
tissue
Organ
884
pancreas
639
connective tissue
625
liver
486
epithelium
462
adipose tissue
362
heart
339
kidney
252
brain
209
vasculature
205
blood vessel
159
bone element
131
artery
105
limb
90
musculature of body
59
eye
53
blood
53
bodily fluid
32
nerve
30
embryo
20
lung
20
vein
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
46
AMP
8
T1D
Genome assembly (visualization)
45
hg19
44
GRCh38
Lab
46
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
target.investigated_as!
control
RNA binding protein
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
pCHi-C
cell line
GM12878
44
1
primary cell
peripheral blood mononuclear cell
8
tissue
small intestine
1
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