Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
6
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
control
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
6
November, 2018
3
December, 2018
1
March, 2020
1
October, 2017
Available data
10
bam
10
bigWig
10
fastq
8
bed narrowPeak
7
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
11
Homo sapiens
Biosample type
11
tissue
Organ
742
pancreas
581
liver
571
connective tissue
435
adipose tissue
401
epithelium
312
kidney
271
heart
159
bone element
143
vasculature
139
blood vessel
112
artery
68
brain
62
blood
62
bodily fluid
57
eye
57
musculature of body
56
limb
20
lung
18
embryo
18
ureter
16
skeleton
11
spleen
8
nerve
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
11
AMP
Genome assembly (visualization)
10
GRCh38
8
hg19
Lab
11
AMP-T2D consortium
target.investigated_as!
control
histone
BIOSAMPLE
ASSAY
11 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
6
2
1
1
1
Download