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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
309
ChIP-seq
Assay category
309
DNA binding
Target of assay
593
histone modification
592
histone
309
narrow histone mark
283
broad histone mark
control
89
transcription factor
23
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
129
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
253
bigWig
251
bed narrowPeak
243
bam
110
tagAlign
108
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
307
Homo sapiens
Biosample type
309
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
32
pancreas
23
heart
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
8
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
307
AMP
2
T1D
Genome assembly (visualization)
239
hg19
236
GRCh38
Lab
309
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
target.investigated_as!
control
BIOSAMPLE
ASSAY
309 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
subcutaneous abdominal adipose tissue
11
kidney
10
heart left ventricle
9
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