Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
17
ChIP-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
44
DNA accessibility
17
DNA binding
4
Transcription
1
DNA methylation
Target of assay
histone
48
histone modification
34
broad histone mark
17
control
14
narrow histone mark
Date released
32
June, 2019
26
October, 2019
6
February, 2021
1
July, 2019
1
May, 2019
Available data
66
bam
44
bed narrowPeak
43
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
66
Homo sapiens
Biosample type
66
tissue
Organ
602
liver
559
connective tissue
552
pancreas
441
adipose tissue
224
epithelium
150
heart
114
kidney
114
vasculature
110
blood vessel
82
artery
77
brain
66
bone element
66
limb
59
blood
59
bodily fluid
43
musculature of body
24
embryo
18
nerve
18
spleen
18
ureter
8
skeleton
6
eye
5
vein
1
pericardium
Project
66
AMP
Genome assembly (visualization)
49
GRCh38
48
hg19
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone
assay_slims!
3D chromatin structure
BIOSAMPLE
ASSAY
66 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
2
11
1
4
muscle of arm
17
muscle of leg
13
1
1
tibial artery
2
5
1
distal epiphysis of femur
1
+ See 7 more…
See all biosamples
Download