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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
histone
54
histone modification
32
transcription factor
29
narrow histone mark
25
broad histone mark
4
chromatin remodeller
3
RNA binding protein
Date released
23
August, 2017
9
November, 2017
November, 2018
Available data
32
bam
32
bigWig
32
fastq
10
bed bed3+
9
bed narrowPeak
9
bigBed narrowPeak
Organism
32
Homo sapiens
Biosample type
18
tissue
9
cell line
5
in vitro differentiated cells
Organ
17
connective tissue
12
adipose tissue
9
liver
6
pancreas
Project
32
AMP
Genome assembly (visualization)
32
hg19
25
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
32
missing controlled_by
Audit category:
4
inconsistent control run_type
3
inconsistent control read length
target.investigated_as!
histone
assay_title!
DNase-seq
month_released!
November, 2018
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
tissue
white adipose tissue
12
islet of Langerhans
6
cell line
HepG2
9
in vitro differentiated cells
adipocyte
5
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