Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
85
single cell RNA-seq
47
WGBS
3
Hi-C
Assay category
DNA accessibility
85
Transcription
47
DNA methylation
3
3D chromatin structure
Date released
74
May, 2022
40
September, 2020
18
February, 2021
3
October, 2022
Available data
93
zippedFastqFolder
40
fastq
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
135
Homo sapiens
Biosample type
135
primary cell
Organ
50
epithelium
50
pancreas
Project
1332
AMP
135
HPAP
47
KPMP
22
T1D
9
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
hg19
Lab
135
Klaus Kaestner, Upenn
Audit category:
3
audit script error
target.investigated_as!
histone
assay_title!
total RNA-seq
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
135 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
WGBS
Hi-C
primary cell
Langerhans cell
85
pancreatic alpha cell
31
1
pancreatic beta cell
16
1
pancreatic acinar cell
1
Download